BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F05LP1|AL426557
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1560 0.0
>3x_Contig1693
Length = 15531
Score = 1560 bits (779), Expect = 0.0
Identities = 823/844 (97%), Gaps = 2/844 (0%)
Strand = Plus / Plus
Query: 1 atcagtgtatgctatctccatcttttacacggatgaggggacagggggaggggagaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14085 atcagtgtatgctatctccatcttttacacggatgaggggacagggggaggggagaacag 14144
Query: 61 tggggcagggatggatgcmgttaagtgtttggagacccgagtttggggagtgcggcacta 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14145 tggggcagggatggatgcagttaagtgtttggagacccgagtttggggagtgcggcacta 14204
Query: 121 gaatcacgtgatttahagttcggtctctggctattttttttttggagttaatagtatagt 180
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14205 gaatcacgtgattgaaagttcggtctctggctattttttttttggagttaatagtatagt 14264
Query: 181 cttactgaatacttcatgcatgcccacatacttcaacatgcmataggaatacggtttaca 240
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 14265 cttactgaatacttcatgcatgcacacatacttcaacatgcaataggaatacggtttaca 14324
Query: 241 cttggtattttaggttgatacataataatatagttttagatacgttagttagatagagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14325 cttggtattttaggttgatacataataatatagttttagatacgttagttagatagagac 14384
Query: 301 aaaaatcmaaatcmaaatcmttaatacgatgttttagaatgtgagggagggggcaggtga 360
||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 14385 aaaaatcaaaatcaaaatcattaatacgatgttttagaatgtgagggagggggcaggtga 14444
Query: 361 ggagataagggaaaggaaatcmatcmatcmtgaattatttcttctcttgtacgtagtttt 420
||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||
Sbjct: 14445 ggagataagggaaaggaaatcaatcaatcatgaattatttcttctcttgtacgtagtttt 14504
Query: 421 gtgccttatctagtcccttttgagtggattcgtgaacaccggcagccgcttgcttggcag 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 14505 gtgccttatctagtcccttttgagtggattcgtgaacaccggcagcagcttgcttggcag 14564
Query: 481 tatgccaggcgtcgtctgttctactccmgaacttaccagtagccttgtcagcccmgtcgt 540
||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 14565 tatgcaaggcgtcgtctgtactactccagaacttaccagtagccttgtcagcccagtcgt 14624
Query: 541 ttacggtattaaccgcmgattggtaattcttttcagcmtcttcgtatttggccttggcag 600
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14625 ttacggtattaaccgcagattggtaattcttttcagcatcttcgtatttggccttggcag 14684
Query: 601 ctttttgtagttcctcattcttttcagcaccgaattgccaccagtgctttgtgtgcttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14685 ctttttgtagttcctcattcttttcagcaccgaattgccaccagtgctttgtgtgcttgt 14744
Query: 661 tcaattcagcacgggcatcttccaatgacttcttggcagcgtctgcngccctttgggcgt 720
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 14745 tcaattcagcacgggcatcttccaatgacttcttggcagcgtctgcagccctttgggcgt 14804
Query: 721 gcatcacgagcggtagaagcggaagcttgggtatctcttcttaccggcttctctccatct 780
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14805 -catcacgagcggtagaagcggaagctt-ggtatctcttcttaccggcttctctccatct 14862
Query: 781 taccaagtcttcgtattcttcttgggccatggtggaagcggtttcaccccaaccttccaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14863 taccaagtcttcgtattcttcttgggccatggtggaagcggtttcaccccaaccttccaa 14922
Query: 841 ggcc 844
||||
Sbjct: 14923 ggcc 14926
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5874
Number of Sequences: 1807
Number of extensions: 5874
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)